The result of Promoter 2.0 Prediction Server is not good if the score is below……………

• A) 1.0
• B) 0.5
• C) 0.8
• D) None of these

Synthetic biology involves designing and constructing novel biological systems using ........................

• A) Microarrays
• B) Antibodies
• C) Restriction enzymes
• D) ORFs

The recommended GC content for oligonucleotide primers is Select the appropriate one

• A) 40 - 60 %
• B) 40 - 50%
• C) 20 - 30%
• D) 70 - 80%

Which type of SNP results in a change in a single nucleotide that leads to the substitution of one amino acid with another in the resulting protein sequence?

• A) Missense SNPs
• B) Transition SNPs
• C) Silent SNPs
• D) Nonsense SNPs

“A” component in object panel in PyMOL is for

• A) Labeling the object
• B) Manipulating the object
• C) Hiding the object
• D) Changing the color of object

ORFs are commonly found within .................

• A) Operons
• B) Promoters
• C) Enhancers
• D) Genes

Promoter 2.0 Prediction Server is a tool used to identify the …………….. Region in a specific part of genome or in whole genome.

• A) Promoter region
• B) Coding region
• C) Termination region
• D) TTATT box

ORFfinder is a commonly used tool for predicting _______ in DNA sequences.

• A) Transcription factors
• B) Open reading frames (ORFs)
• C) Promoters
• D) Enhancers

The training step in AUGUSTUS requires a set of known or well-annotated genes from the ........................... organism.

• A) Unrelated
• B) Different
• C) Related
• D) Same

What type of files can be loaded into PyMOL for analysis?

• A) DNA sequence files
• B) Excel spreadsheets
• C) PDB files
• D) RNA synthesis files

Which of the following tasks can be accomplished using PyMOL?

• A) Performing protein folding simulations
• B) Synthesizing new proteins
• C) Creating high-quality images of protein structures
• D) Conducting functional assays on proteins

The purpose of submitting SNP data to the dbSNP database is __________

• A) To perform statistical analysis on the frequency of SNPs
• B) To download the SNP data in different file formats
• C) To visualize the SNPs on a genome browser
• D) To obtain a unique identifier (RS ID) for each SNP

The output of GeneMark is typically presented in a standard format, such as _______ format.

• A) SAM
• B) FASTA
• C) BED
• D) GTF

Which of the following accurately describes a single nucleotide polymorphism (SNP)?

• A) It is a DNA sequence variation occurring when two nucleotides in the gene differ between members of a species.
• B) It is a DNA sequence variation occurring when multiple nucleotides in the gene differ between members of a species.
• C) It is a DNA sequence variation occurring when a nucleotide is replaced by a different amino acid within a gene.
• D) It is a DNA sequence variation occurring when a single nucleotide in the gene differs between members of a species.

You can add the hydrogen atoms in your protein by clicking on ……………………. tab of Discovery Studio Visualizer.

• A) Chemistry tab
• B) Chart tab
• C) None of these
• D) Tools tab

There are ………………. different types of amino acids that can be combined to make a protein.

• A) 30
• B) 40
• C) 20
• D) 50

Promoter 2.0 Prediction Server accepts at most …………….. sequences in total per submission.

• A) 60
• B) 80
• C) 70
• D) 50

Which one of the following is NOT a commonly used identifier in the ENA database?

• A) Sequence version
• B) Taxonomic identifier
• C) Barcode
• D) Accession number

The ……………………. is a free, feature-rich molecular modeling application for viewing, sharing and analyzing protein and small molecule data.

• A) Discovery Studio Visualizer
• B) Rasmol
• C) Pymol
• D) Chimera

What is the typical output format of a sequence retrieval search result? [Choose the most appropraite one]

• A) XML
• B) FASTA
• C)
• D)